Modelling and Simulation of Asynchronous Real-Time Systems using Timed Rebeca

In this paper we propose an extension of the Rebeca language that can be used to model distributed and asynchronous systems with timing constraints. We provide the formal semantics of the language using Structural Operational Semantics, and show its expressiveness by means of examples. We developed a tool for automated translation from timed Rebeca to the Erlang language, which provides a first implementation of timed Rebeca. We can use the tool to set the parameters of timed Rebeca models, which represent the environment and component variables, and use McErlang to run multiple simulations for different settings. Timed Rebeca restricts the modeller to a pure asynchronous actor-based paradigm, where the structure of the model represents the service oriented architecture, while the computational model matches the network infrastructure. Simulation is shown to be an effective analysis support, specially where model checking faces almost immediate state explosion in an asynchronous setting.Comment: In Proceedings FOCLASA 2011, arXiv:1107.584

Symmetry and partial order reduction techniques in model checking Rebeca

Rebeca is an actor-based language with formal semantics that can be used in modeling concurrent and distributed software and protocols. In this paper, we study the application of partial order and symmetry reduction techniques to model checking dynamic Rebeca models. Finding symmetry based equivalence classes of states is in general a difficult problem known to be as hard as graph isomorphism. We show how, for Rebeca models, we can tackle this problem with a polynomial-time solution. Moreover, the coarse-grained interleaving semantics of Rebeca causes considerable reductions when partial order reduction is applied. We have also developed a tool that can make use of both techniques in combination or separately. The evaluation results show significant improvements in model size and model-checking time

Regular symmetry patterns

Symmetry reduction is a well-known approach for alleviating the state explosion problem in model checking. Automatically identifying symmetries in concurrent systems, however, is computationally expensive. We propose a symbolic framework for capturing symmetry patterns in parameterised systems (i.e. an infinite family of finite-state systems): two regular word transducers to represent, respectively, parameterised systems and symmetry patterns. The framework subsumes various types of "symmetry relations" ranging from weaker notions (e.g. simulation preorders) to the strongest notion (i.e. isomorphisms). Our framework enjoys two algorithmic properties: (1) symmetry verification: given a transducer, we can automatically check whether it is a symmetry pattern of a given system, and (2) symmetry synthesis: we can automatically generate a symmetry pattern for a given system in the form of a transducer. Furthermore, our symbolic language allows additional constraints that the symmetry patterns need to satisfy to be easily incorporated in the verification/synthesis. We show how these properties can help identify symmetry patterns in examples like dining philosopher protocols, self-stabilising protocols, and prioritised resource-allocator protocol. In some cases (e.g. Gries's coffee can problem), our technique automatically synthesises a safety-preserving finite approximant, which can then be verified for safety solely using a finite-state model checker.UPMAR

Compositional schedulability analysis of real-time actor-based systems

We present an extension of the actor model with real-time, including deadlines associated with messages, and explicit application-level scheduling policies, e.g.,"earliest deadline first" which can be associated with individual actors. Schedulability analysis in this setting amounts to checking whether, given a scheduling policy for each actor, every task is processed within its designated deadline. To check schedulability, we introduce a compositional automata-theoretic approach, based on maximal use of model checking combined with testing. Behavioral interfaces define what an actor expects from the environment, and the deadlines for messages given these assumptions. We use model checking to verify that actors match their behavioral interfaces. We extend timed automata refinement with the notion of deadlines and use it to define compatibility of actor environments with the behavioral interfaces. Model checking of compatibility is computationally hard, so we propose a special testing process. We show that the analyses are decidable and automate the process using the Uppaal model checke

Building Science Gateways for Analysing Molecular Docking Results Using a Generic Framework and Methodology

Molecular docking and virtual screening experiments require large computational and data resources and high-level user interfaces in the form of science gateways. While science gateways supporting such experiments are relatively common, there is a clearly identified need to design and implement more complex environments for further analysis of docking results. This paper describes a generic framework and a related methodology that supports the efficient development of such environments. The framework is modular enabling the reuse of already existing components. The methodology, which proposes three techniques that the development team can use, is agile and encourages active participation of end-users. Based on the framework and methodology, two prototype implementations of science-gateway-based docking environments are presented and evaluated. The first system recommends a receptor-ligand pair for the next docking experiment, and the second filters docking results based on ligand properties

Efficient symmetry reduction for an actor-based model

Symmetry reduction is a promising technique for combatting state space explosion in model checking. The problem of finding the equivalence classes, i.e., the so-called orbits, of states under symmetry is a difficult problem known to be as hard as graph isomorphism. In this paper, we show how we can automatically find the orbits in an actor-based model, called Rebeca, without enforcing any restriction on the modeler. The proposed algorithm solves the orbit problem for Rebeca models in polynomial time. As a result, the simple actor-based Rebeca language can be utilized efficiently for modeling and verification of systems, without involving the modeler with the details of the verification technique implemented

Efficient symmetry reduction for an actor-based model

Symmetry reduction is a promising technique for combatting state space explosion in model checking. The problem of finding the equivalence classes, i.e., the so-called orbits, of states under symmetry is a difficult problem known to be as hard as graph isomorphism. In this paper, we show how we can automatically find the orbits in an actor-based model, called Rebeca, without enforcing any restriction on the modeler. The proposed algorithm solves the orbit problem for Rebeca models in polynomial time. As a result, the simple actor-based Rebeca language can be utilized efficiently for modeling and verification of systems, without involving the modeler with the details of the verification technique implemented